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10.0 years ago • updated 9.9 years ago
Doe, Aimee
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I've seen in some papers ~1 TPM for saying something in mouse/human etc. was "minimally expressed".
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The behavior you have documented in not surprising and is explained in the featureCounts documentation.
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No, featureCounts cannot change the XS tag to a different tag, because that would change the information in the output. featureCounts needs…
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Thanks! This one might be worth remaking with `ComplexHeatmap`. Similar to https://github.com/LieberInstitute/spatialLIBD/pull/91 that was …
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Full disclosure: I don't use `DESeq2`, and find the contrasts specification confusing. Because of that, I generally recommend using `result…
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